Literature And External Packages
Core Physics Reference
Javier Escoto, Fast monoenergetic neoclassical transport coefficients in stellarators, PhD thesis, 2025: arXiv:2510.27513
This is the primary reference for:
the monoenergetic formulation
the Legendre-space block-tridiagonal solve
Onsager symmetry in the monoenergetic setting
the derivative and optimization discussion
Neoclassical Transport Theory
Helander and Sigmar, Collisional Transport in Magnetized Plasmas: Cambridge University Press
Helander 2014, theory of non-axisymmetric confinement: Reports on Progress in Physics
Helander and Simakov 2008, intrinsic ambipolarity and stellarator rotation: Physical Review Letters, PubMed
Landreman 2011, monoenergetic approximation limits: PPCF, arXiv:1102.2508
Landreman, Smith, Mollen, and Helander 2014, trajectory and collision-operator comparisons: Physics of Plasmas, arXiv:1312.6058
Redl, Angioni, Belli, and Sauter 2021, analytic bootstrap-current and neoclassical-conductivity formulae: PDF
Landreman, Buller, and Drevlak 2022, quasisymmetric-stellarator use of the Redl bootstrap-current formula and comparison to a 4D drift-kinetic solver: arXiv:2205.02914
Ferraro et al. 2025, implementation of Redl-style bootstrap-current modeling in an extended-MHD workflow using trapped fraction, collisionality, effective charge, and geometry factors: JPP
Beidler et al. 2011, international monoenergetic coefficient benchmark: Nuclear Fusion
These are the main references for:
radially local drift-kinetic ordering
thermodynamic forces
the ambipolar radial-current condition that determines
E_rin non-quasisymmetric stellaratorsneoclassical transport matrix structure
bootstrap-current interpretation
expected limits of exact parity between reduced monoenergetic workflows and broader drift-kinetic solvers
why the Redl precise-QS comparison is a separate analytic bootstrap-current validation from the reduced NTX+NEOPAX closure stress metric
why the finite-beta closure-target audit ranks local drivers such as
epsilon, trapped fraction, and collisionality instead of introducing a scalar fitted current correctionthe required benchmark surface for
D11,D31, andD33
Differentiable And Optimization Workflows
Paul, Abel, Landreman, and Dorland 2019, adjoint derivatives for neoclassical stellarator optimization: JPP, arXiv:1904.06430
McGreivy 2024, differentiable programming for computational plasma physics: arXiv:2410.11161
Lee, Lazerson, Smith, Beidler, and Pablant 2024, direct optimization of neoclassical ion transport in stellarator reactors: Nuclear Fusion, arXiv:2406.04147
These references anchor NTX’s autodiff tests:
direct automatic differentiation against centered finite differences
prepared implicit or adjoint derivatives for many controls
inverse-design recovery from generated targets
uncertainty propagation from Jacobians
profile and geometry optimization with explicit physical metrics rather than reduced-response-only validation
Geometry-Breadth And Future Benchmark Families
Plunk, Landreman, and Helander 2019, direct construction of omnigenous magnetic fields near the magnetic axis: JPP, arXiv:1909.08919
Rodríguez, Plunk, and Jorge 2025, second-order quasi-isodynamic near-axis construction: JPP
Bindel, Landreman, and Padidar 2023/2025, direct optimization of fast-ion confinement: PPCF, arXiv:2302.11369
Calvo, Velasco, Helander, and Parra 2025, piecewise omnigenous fields with zero bootstrap current: Phys. Rev. E, arXiv:2505.02546
Liu, Yu, Velasco, and Zhu 2026, combined omnigenity and piecewise-omnigenity optimization: arXiv:2603.12139
These papers motivate the planned geometry-breadth lane. NTX should not promote hidden-symmetry, quasi-isodynamic, or omnigenous validation claims until the corresponding reusable geometry inputs, normalization audits, and convergence ladders are owned by the repository.
Momentum-Restoring Closure Theory
Taguchi 1992: Physics of Fluids B
Sugama and Nishimura 2002: Physics of Plasmas
Sugama and Nishimura 2008: Physics of Plasmas
Maa{\ss}berg et al. 2009: Physics of Plasmas
These references matter for:
momentum restoration beyond Lorentz pitch-angle scattering
Sonine/Laguerre moment equations
bootstrap-current sensitivity to higher-order closure moments
physically justified validation gates for reduced closure models
JAX And Python Geometry Packages
Lineax for possible structured linear solves after profiling identifies a real solve bottleneck
Equinox for possible PyTree/module and filtered-transform ergonomics after the public API boundaries are settled
Use these packages conservatively. The current NTX performance profile says the near-term speed lane is stable shapes, reusable compiled functions, prepared geometry reuse, and clear compile-versus-steady-state accounting. New dependencies should follow a measured profile improvement, not precede it.
Independent Validation Ecosystem
NTX users often want to compare against other neoclassical tools or pipelines. The repository documentation refers to:
SFINCS-JAX when discussing independent consistency checks
These packages are useful for trust-building and application workflows, but NTX’s equations, numerics, and public interface are defined by its own source tree and the Escoto thesis.